So, something I've learned:
If you have too high resistance, AKA, your glow plugs aren't drawing enough power, your controller will short cycle, because it thinks they are hot.
It's measuring the resistance/current using that metal zig-zag piece on the controller.
So, if you want the controller to think the plugs are cooler, therefor drawing more power, you need to increase the voltage across that zig-zag piece. You do this by increasing the resistance of that piece.
How do you do that? By changing the cross-section. I found that taking a "junk" Motorcraft controller that short-cycled, pulled the zig-zag off, ground a 1/16" deep notch right next to the "hole" in the center(the highest resistance spot in the resistor)... and hey, it cycles longer! Been running it for a couple months now, really happy.
Using that method, even if your new harness or glow plugs are out of tolerance on the high side, you can fix it!
(if you need lower resistance, you would probably just do a resistor voltage divider to ground on the controller's "sense" wire).