Is it really hard starting? I would think it would be with only 1 working glowplug. If it starts easy maybe the shop is trying to sell you a set of glowplugs. Mine will start with no glow but it needs to be a warm summer day and about a 10 second crank, maybe mines not in as good a shape as others though.
It is possible that timing ate them, or theoretically possible (though doubtful) that WMO killed them, but unless you also had timing adjusted when you changed the glowplugs I would guess your controller is keeping them on too long.
I like a push button setup a lot. I glow just long enough to get an easy start. So at 80-90 degrees its 6 seconds, up to 12-14 at 0. So I just guess in between. With recent 60s I give it about 8 seconds.